PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr8P09170_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 121aa    MW: 14037.2 Da    PI: 8.8262
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr8P09170_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.49.6e-122269455
                           HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                           +h+++Er RR++i +++  L++l+P +    +k   Ka++L + ++Y++sLq
  GSMUA_Achr8P09170_001 22 SHSIAERVRREKISQRMKLLQSLVPGC----DKITGKAQVLDEITNYVRSLQ 69
                           8*************************9....899*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.26E-81669No hitNo description
SuperFamilySSF474594.84E-171686IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.2311868IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-161889IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.7E-92269IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-72474IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    Send to blast
MIPQPPTGYI HVRARRGQAT DSHSIAERVR REKISQRMKL LQSLVPGCDK ITGKAQVLDE  60
ITNYVRSLQY QVEFLSMRLA LLNPTLHDLD EECSGGLLEQ QLQVNYKQQL LHFLYCRTVY  120
H
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008790706.12e-48PREDICTED: transcription factor bHLH137-like
SwissprotQ93W884e-44BH137_ARATH; Transcription factor bHLH137
TrEMBLM0TNX05e-86M0TNX0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr8P09170_0011e-85(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP23583791
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.22e-45bHLH family protein